RNAseq based variant dataset in a black poplar association panel.

ABSTRACT:

Objective

Black poplar (Populus nigra L.) is a species native to Eurasia with a wide distribution area. It is an ecologically important species from riparian ecosystems, that is used as a parent of interspecific (P. deltoides x P. nigra) cultivated poplar hybrids. Variant detection from transcriptomics sequences of 241 P. nigra individuals, sampled in natural populations from 11 river catchments (in four European countries) is described here. These data provide new valuable resources for population structure analysis, population genomics and genome-wide association studies.

Data description

We generated transcriptomics data from a mixture of young differentiating xylem and cambium tissues of 480 Populus nigra trees sampled in a common garden experiment located at Orléans (Fr

SUBMITTER: Rogier O 

PROVIDER: S-EPMC10546633 | biostudies-literature | 2023 Oct

REPOSITORIES: biostudies-literature