VoDEx: a Python library for time annotation and management of volumetric functional imaging data.

ABSTRACT:

Summary

In functional imaging studies, accurately synchronizing the time course of experimental manipulations and stimulus presentations with resulting imaging data is crucial for analysis. Current software tools lack such functionality, requiring manual processing of the experimental and imaging data, which is error-prone and potentially non-reproducible. We present VoDEx, an open-source Python library that streamlines the data management and analysis of functional imaging data. VoDEx synchronizes the experimental timeline and events (e.g. presented stimuli, recorded behavior) with imaging data. VoDEx provides tools for logging and storing the timeline annotation, and enables retrieval of imaging data based on specific time-based and manipulation-based experimental conditions.

SUBMITTER: Nadtochiy A 

PROVIDER: S-EPMC10562951 | biostudies-literature | 2023 Sep

REPOSITORIES: biostudies-literature