FrameD: framework for DNA-based data storage design, verification, and validation.

ABSTRACT:

Motivation

DNA-based data storage is a quickly growing field that hopes to harness the massive theoretical information density of DNA molecules to produce a competitive next-generation storage medium suitable for archival data. In recent years, many DNA-based storage system designs have been proposed. Given that no common infrastructure exists for simulating these storage systems, comparing many different designs along with many different error models is increasingly difficult. To address this challenge, we introduce FrameD, a simulation infrastructure for DNA storage systems that leverages the underlying modularity of DNA storage system designs to provide a framework to express different designs while being able to reuse common components.

Results

We demonstrate the utility

SUBMITTER: Volkel KD 

PROVIDER: S-EPMC10563143 | biostudies-literature | 2023 Oct

REPOSITORIES: biostudies-literature