Ontology highlight
ABSTRACT:
SUBMITTER: Blaskovic S
PROVIDER: S-EPMC10571657 | biostudies-literature | 2023 Sep
REPOSITORIES: biostudies-literature
Blaskovic Sanja S Anagnostopoulou Pinelopi P Borisova Elena E Schittny Dominik D Donati Yves Y Haberthür David D Zhou-Suckow Zhe Z Mall Marcus A MA Schlepütz Christian M CM Stampanoni Marco M Barazzone-Argiroffo Constance C Schittny Johannes C JC
Cells 20230928 19
(1) Background: Stereological estimations significantly contributed to our understanding of lung anatomy and physiology. Taking stereology fully 3-dimensional facilitates the estimation of novel parameters. (2) Methods: We developed a protocol for the analysis of all airspaces of an entire lung. It includes (i) high-resolution synchrotron radiation-based X-ray tomographic microscopy, (ii) image segmentation using the free machine-learning tool Ilastik and ImageJ, and (iii) calculation of the air ...[more]