Genotype and phenotype data standardization, utilization and integration in the big data era for agricultural sciences.

ABSTRACT: Large-scale genotype and phenotype data have been increasingly generated to identify genetic markers, understand gene function and evolution and facilitate genomic selection. These datasets hold immense value for both current and future studies, as they are vital for crop breeding, yield improvement and overall agricultural sustainability. However, integrating these datasets from heterogeneous sources presents significant challenges and hinders their effective utilization. We established the Genotype-Phenotype Working Group in November 2021 as a part of the AgBioData Consortium (https://www.agbiodata.org) to review current data types and resources that support archiving, analysis and visualization of genotype and phenotype data to understand the needs and challenges of the plant genomic re

SUBMITTER: Deng CH 

PROVIDER: S-EPMC10712715 | biostudies-literature | 2023 Dec

REPOSITORIES: biostudies-literature