Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft genome sequences of two Pseudomonas strains isolated from ¹²⁹I plumes at the Hanford Site.

ABSTRACT: Pseudomonas strains DVZ6 and DVZ24 were isolated from a sediment trap incubated in an ¹²⁹I plume at the Hanford Site (Washington State, USA). Whole-genome sequencing of the strains revealed that both genomes are 5.77 Mb in size, with a G + C content of 64.75%.

SUBMITTER: Robinson CJ

PROVIDER: S-EPMC10720529 | biostudies-literature | 2023 Nov

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Draft genome sequences of two Pseudomonas strains isolated from 129I plumes at the Hanford Site.

Robinson Courtney J CJ Oliver Jerome J O JJO Anike Alexis A Howard M Hope MH Saunders Danielle L DL Lee Brady D BD

Microbiology resource announcements 20231110 12

Pseudomonas strains DVZ6 and DVZ24 were isolated from a sediment trap incubated in an 129I plume at the Hanford Site (Washington State, USA). Whole-genome sequencing of the strains revealed that both genomes are 5.77 Mb in size, with a G + C content of 64.75%. ...[more]

PMID: 37948307

Similar Datasets

Two draft genome sequences of Pseudomonas jessenii strains isolated from a copper contaminated site in Denmark.

Project description:Pseudomonas jessenii C2 and Pseudomonas jessenii H16 were isolated from low-Cu and high-Cu industrially contaminated soil, respectively. P. jessenii H16 displayed significant resistance to copper when compared to P. jessenii C2. Here we describe genome sequences and interesting features of these two strains. The genome of P. jessenii C2 comprised 6,420,113 bp, with 5814 protein-coding genes and 67 RNA genes. P. jessenii H16 comprised 6,807,788 bp, with 5995 protein-coding genes and 70 RNA genes. Of special interest was a specific adaptation to this harsh copper-contaminated environment as P. jessenii H16 contained a novel putative copper resistance genomic island (GI) of around 50,000 bp.

| S-EPMC5100093 | biostudies-literature

Draft Genome Sequences of Pseudomonas sp. Strains Isolated from Wheat in Germany.

Project description:Three chloramphenicol-resistant Pseudomonas sp. strains were isolated from wheat grain in Germany on rose Bengal agar. The draft genome sizes ranged from 5,924,931 to 6,124,470 bp. All the isolates possessed genes for efflux pumps that might be responsible for an intrinsic chloramphenicol resistance. No acquired antibiotic resistance genes in these strains could be determined.

| S-EPMC6509520 | biostudies-literature

Draft Genome Sequences of Hazelnut-Associated Pseudomonas Strains Isolated in Ontario, Canada.

Project description:Two Pseudomonas strains (H346-M and H346-S) were isolated from hazelnut trees showing symptoms of shoot dieback and necrosis. The draft genome sequences of H346-M and H346-S consist of 66 and 51 contigs, respectively, with total sizes of 5,693,988 and 5,889,925 bp and 4,885 and 5,045 protein-coding sequences, respectively.

| S-EPMC7645666 | biostudies-literature

Draft Genomic Sequences of Pseudomonas moorei Strains Isolated from Wild Cranberry Bogs in Massachusetts.

Project description:Pseudomonas moorei has been used to detoxify recalcitrant environmental contaminants from the pharmaceutical industry. Two P. moorei strains were isolated from soil in the pristine wild cranberry bogs of the Cape Cod National Seashore that putatively encode genes for degradation of 4- and 5-chlorosalicylates, acetaminophen, and diclofenac.

| S-EPMC9584317 | biostudies-literature

Draft Genome Sequences of Three Pseudomonas chengduensis Strains Isolated from Desert Soil in Morocco.

Project description:We report the draft genome sequences of three Pseudomonas chengduensis strains isolated from the sand dunes of the Merzouga (MDMC17 strain) and Erg Lihoudi (MDMC216 and MDMC224 strains) regions in the Moroccan desert. These bacteria are able to tolerate the harsh environmental conditions of the desert ecosystem.

| S-EPMC9933653 | biostudies-literature

Draft Genome Sequences of 10 Environmental Pseudomonas aeruginosa Strains Isolated from Soils, Sediments, and Waters.

Project description:Pseudomonas aeruginosa is an important opportunistic pathogen that has the ability to grow in a range of environmental niches. Here, we report the draft genome sequences of 10 environmental strains of the bacterium isolated from soils, sediments, and waters in various locations in North America and South Africa.

| S-EPMC5571407 | biostudies-literature

Draft Genome Sequences of Endophytic Pseudomonas Strains, Isolated from the Interior of Brassicaceae Plants.

Project description:Members of the genus Pseudomonas have often been studied as agricultural biocontrol agents to activate plant immune responses. Here, we report the draft genome sequences of six Pseudomonas strains that were isolated from the interior of Brassicaceae plants.

| S-EPMC10112059 | biostudies-literature

Draft Genome Sequences of Four Commensal Strains of Staphylococcus and Pseudomonas Isolated from Healthy Human Skin.

Project description:Staphylococcus spp. and Pseudomonas spp. are widely distributed bacteria in the environment and are found in association with animals and humans. Here, we present the draft genome sequence data of the healthy human skin commensal strains Staphylococcus aureus MFP03, Staphylococcus epidermidis MFP04, Staphylococcus capitis MFP08, and Pseudomonas fluorescens MFP05.

| S-EPMC8407689 | biostudies-literature

Draft Genome Sequences of Pseudomonas aeruginosa B3 Strains Isolated from a Cystic Fibrosis Patient Undergoing Antibiotic Chemotherapy.

Project description:Pseudomonas aeruginosa frequently establishes chronic infections in the airways of patients suffering from cystic fibrosis (CF). Here, we report the draft genome sequences of four P. aeruginosa B3 strains isolated from a chronically infected CF patient undergoing antibiotic chemotherapy.

| S-EPMC3798451 | biostudies-literature

Draft genome sequence of Enterobacter hormaechei DVZ29, an iodide-oxidizing bacterium isolated from the Hanford site.

Project description:Enterobacter hormaechei DVZ29 was isolated from a sediment trap incubated in an 129I plume at the Hanford Site (Washington State, USA). A whole genome sequencing of the strain resulted in 32 contigs and revealed that the genome is 4.90 Mb, with a G + C content of 55.61%.

| S-EPMC10652935 | biostudies-literature