Dataset Information

A glycosylation-related signature predicts survival in pancreatic cancer.

ABSTRACT:

Background

Tumor initiation and progression are closely associated with glycosylation. However, glycosylated molecules have not been the subject of extensive studies as prognostic markers for pancreatic cancer. The objectives of this study were to identify glycosylation-related genes in pancreatic cancer and use them to construct reliable prognostic models.

Materials and methods

The Cancer Genome Atlas and Gene Expression Omnibus databases were used to assess the differential expression of glycosylation-related genes; four clusters were identified based on consistent clustering analysis. Kaplan-Meier analyses identified three glycosylation-related genes associated with overall survival. LASSO analysis was then performed on The Cancer Genome Atlas and International Cancer Genome Consortium databases to identify glycosylation-related signatures. We identified 12 GRGs differently expressed in pancreatic cancer and selected three genes (SEL1L, TUBA1C, and SDC1) to build a prognostic model. Thereafter, patients were divided into high and low-risk groups. Eventually, we performed Quantitative real-time PCR (qRT-PCR) to validate the signature.

Results

Clinical outcomes were significantly poorer in the high-risk group than in the low-risk group. There were also significant correlations between the high-risk group and several risk factors, including no-smoking history, drinking history, radiotherapy history, and lower tumor grade. Furthermore, the high-risk group had a higher proportion of immune cells. Eventually, three glycosylation-related genes were validated in human PC cell lines.

Conclusion

This study identified the glycosylation-related signature for pancreatic cancer. It is an effective predictor of survival and can guide treatment decisions.

SUBMITTER: Hu H

PROVIDER: S-EPMC10756102 | biostudies-literature | 2023 Nov

REPOSITORIES: biostudies-literature

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Publications

A glycosylation-related signature predicts survival in pancreatic cancer.

Hu Huidong H He Bingsheng B He Mingang M Tao Hengmin H Li Baosheng B

Aging 20231130 23

<h4>Background</h4>Tumor initiation and progression are closely associated with glycosylation. However, glycosylated molecules have not been the subject of extensive studies as prognostic markers for pancreatic cancer. The objectives of this study were to identify glycosylation-related genes in pancreatic cancer and use them to construct reliable prognostic models.<h4>Materials and methods</h4>The Cancer Genome Atlas and Gene Expression Omnibus databases were used to assess the differential expr ...[more]

PMID: 38048216

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Dataset Information

A glycosylation-related signature predicts survival in pancreatic cancer.

Background

Materials and methods

Results

Conclusion

Publications

A glycosylation-related signature predicts survival in pancreatic cancer.

Similar Datasets

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