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Dataset Information

Hypoxia is correlated with the tumor immune microenvironment: Potential application of immunotherapy in bladder cancer.


ABSTRACT:

Objective

Hypoxia, which can considerably affect the tumor microenvironment, hinders the use of immunotherapy in bladder cancer (BLCA). Therefore, we aimed to identify reliable hypoxia-related biomarkers to guide clinical immunotherapy in BLCA.

Methods

Using data downloaded from TCGA-BLCA cohort, we determined BLCA subtypes which divide 408 samples into different subtypes. Tumor immune infiltration levels of two clusters were quantified using ssGSEA, MCPcounter, EPIC, ESTIMATE, and TIMER algorithms. Next, we constructed a hypoxia score based on the expression of hypoxia-related genes. The IMvigor210 cohort and SubMap analysis were used to predict immunotherapeutic responses in patients with different hypoxia scores. Hub genes were screened using cytoscape, immunohistochemist

SUBMITTER: Chen H 

PROVIDER: S-EPMC10757107 | biostudies-literature | 2023 Dec

REPOSITORIES: biostudies-literature