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Epigenetic repression of CHCHD2 enhances survival from single cell dissociation through attenuated Rho A kinase activity.


ABSTRACT: During in vitro culture, human pluripotent stem cells (hPSCs) often acquire survival advantages characterized by decreased susceptibility to mitochondrial cell death, known as "culture adaptation." This adaptation is associated with genetic and epigenetic abnormalities, including TP53 mutations, copy number variations, trisomy, and methylation changes. Understanding the molecular mechanisms underlying this acquired survival advantage is crucial for safe hPSC-based cell therapies. Through transcriptome and methylome analysis, we discovered that the epigenetic repression of CHCHD2, a mitochondrial protein, is a common occurrence during in vitro culture using enzymatic dissociation. We confirmed this finding through genetic perturbation and reconstitution experiments in normal human embryonic stem cells (hESCs). Loss of CHCHD2 expression conferred resistance to single cell dissociation-induced cell death, a common stress encountered during in vitro culture. Importantly, we found that the downregulation of CHCHD2 significantly attenuates the activity of Rho-associated protein kinase (ROCK), which is responsible for inducing single cell death in hESCs. This suggests that hESCs may survive routine enzyme-based cell dissociation by downregulating CHCHD2 and thereby attenuating ROCK activity. These findings provide insights into the mechanisms by which hPSCs acquire survival advantages and adapt to in vitro culture conditions.

SUBMITTER: Kim J 

PROVIDER: S-EPMC10787008 | biostudies-literature | 2024 Jan

REPOSITORIES: biostudies-literature

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Epigenetic repression of CHCHD2 enhances survival from single cell dissociation through attenuated Rho A kinase activity.

Kim Jumee J   Kwon Eun-Ji EJ   Kim Yun-Jeong YJ   Kim Dayeon D   Shin Yoon-Ze YZ   Gil Dayeon D   Kim Jung-Hyun JH   Shin Hyoung Doo HD   Kim Lyoung Hyo LH   Lee Mi-Ok MO   Go Young-Hyun YH   Cha Hyuk-Jin HJ  

Cellular and molecular life sciences : CMLS 20240112 1


During in vitro culture, human pluripotent stem cells (hPSCs) often acquire survival advantages characterized by decreased susceptibility to mitochondrial cell death, known as "culture adaptation." This adaptation is associated with genetic and epigenetic abnormalities, including TP53 mutations, copy number variations, trisomy, and methylation changes. Understanding the molecular mechanisms underlying this acquired survival advantage is crucial for safe hPSC-based cell therapies. Through transcr  ...[more]

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