Genome-wide analysis and expression pattern of the ZoPP2C gene family in Zingiber officinale Roscoe.

ABSTRACT:

Background

Protein phosphatases type 2C (PP2C) are heavily involved in plant growth and development, hormone-related signaling pathways and the response of various biotic and abiotic stresses. However, a comprehensive report identifying the genome-scale of PP2C gene family in ginger is yet to be published.

Results

In this study, 97 ZoPP2C genes were identified based on the ginger genome. These genes were classified into 15 branches (A-O) according to the phylogenetic analysis and distributed unevenly on 11 ginger chromosomes. The proteins mainly functioned in the nucleus. Similar motif patterns and exon/intron arrangement structures were identified in the same subfamily of ZoPP2Cs. Collinearity analysis indicated that ZoPP2Cs had 33 pairs of fragment duplicated events unifor

SUBMITTER: Zhang P 

PROVIDER: S-EPMC10799369 | biostudies-literature | 2024 Jan

REPOSITORIES: biostudies-literature