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Supergene evolution via gain of auto-regulation.


ABSTRACT: The development of complex phenotypes requires the coordinated action of many genes across space and time, yet many species have evolved the ability to develop multiple discrete, alternate phenotypes1-3. Such polymorphisms are often controlled by supergenes, sets of tightly-linked mutations in one or more loci that function together to produce a complex phenotype4. Although theories of supergene evolution are well-established, the mutations that cause functional differences between supergene alleles remain essentially unknown. doublesex is the master regulator of insect sexual differentiation but functions as a supergene in multiple Papilio swallowtail butterflies, where divergent dsx alleles control development of discrete non-mimetic or mimetic female wing color patterns5-7. Here we demonstrate that the functional elements of the mimetic allele in Papilio alphenor are six new cis-regulatory elements (CREs) spread across 150 kb that are bound by DSX itself. Our findings provide experimental support to classic supergene theory and suggest that the evolution of auto-regulation may provide a simple route to supergene origination and to the co-option of pleiotropic genes into new developmental roles.

SUBMITTER: VanKuren NW 

PROVIDER: S-EPMC10802445 | biostudies-literature | 2024 Jan

REPOSITORIES: biostudies-literature

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Supergene evolution via gain of autoregulation.

VanKuren Nicholas W NW   Sheikh Sofia I SI   Fu Claire L CL   Massardo Darli D   Lu Wei W   Kronforst Marcus R MR  

bioRxiv : the preprint server for biology 20241216


Development requires the coordinated action of many genes across space and time, yet numerous species have evolved the ability to develop multiple discrete, alternate phenotypes<sup>1-5</sup>. Such polymorphisms are often controlled by supergenes, sets of tightly-linked loci that function together to control development of a polymorphic phenotype<sup>6-10</sup>. Although theories of supergene evolution are well-established, the mutations that cause functional differences between supergene allele  ...[more]