Co-Expression Network Analysis of Soybean Transcriptome Identify Hub Genes Under Saline-Alkaline and Water Deficit Stress.

ABSTRACT:

Background

Soybean is an important oilseed crop that its development and production are affected by environmental stresses (such as saline-alkaline and water deficit).

Objectives

This experiment was performed with the aim of identifying candidate genes in saline-alkaline stress and water-deficit stress conditions using transcriptome analysis and to investigate the expression of these genes under water deficit stress conditions using RTqPCR.

Materials and methods

In this experiment, soybean transcriptome data under saline-alkaline and water-deficit stress were downloaded from the NCBI website, and then the co-expression modules were determined for them and the gene network was plotted for each module, and finally, the hub genes were identified. To compare the expressio

SUBMITTER: Ghanbari Moheb Seraj R 

PROVIDER: S-EPMC10858369 | biostudies-literature | 2022 Oct

REPOSITORIES: biostudies-literature