HAIviz: an interactive dashboard for visualising and integrating healthcare-associated genomic epidemiological data.

ABSTRACT: Existing tools for phylogeographic and epidemiological visualisation primarily provide a macro-geographic view of epidemic and pandemic transmission events but offer little support for detailed investigation of outbreaks in healthcare settings. Here, we present HAIviz, an interactive web-based application designed for integrating and visualising genomic epidemiological information to improve the tracking of healthcare-associated infections (HAIs). HAIviz displays and links the outbreak timeline, building map, phylogenetic tree, patient bed movements, and transmission network on a single interactive dashboard. HAIviz has been developed for bacterial outbreak investigations but can be utilised for general epidemiological investigations focused on built environments for which visualisation to

SUBMITTER: Permana B 

PROVIDER: S-EPMC10926687 | biostudies-literature | 2024 Feb

REPOSITORIES: biostudies-literature