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Integrated proteogenomic characterization of glioblastoma evolution.


ABSTRACT: The evolutionary trajectory of glioblastoma (GBM) is a multifaceted biological process that extends beyond genetic alterations alone. Here, we perform an integrative proteogenomic analysis of 123 longitudinal glioblastoma pairs and identify a highly proliferative cellular state at diagnosis and replacement by activation of neuronal transition and synaptogenic pathways in recurrent tumors. Proteomic and phosphoproteomic analyses reveal that the molecular transition to neuronal state at recurrence is marked by post-translational activation of the wingless-related integration site (WNT)/ planar cell polarity (PCP) signaling pathway and BRAF protein kinase. Consistently, multi-omic analysis of patient-derived xenograft (PDX) models mirror similar patterns of evolutionary trajectory. Inhibition of B-raf proto-oncogene (BRAF) kinase impairs both neuronal transition and migration capability of recurrent tumor cells, phenotypic hallmarks of post-therapy progression. Combinatorial treatment of temozolomide (TMZ) with BRAF inhibitor, vemurafenib, significantly extends the survival of PDX models. This study provides comprehensive insights into the biological mechanisms of glioblastoma evolution and treatment resistance, highlighting promising therapeutic strategies for clinical intervention.

SUBMITTER: Kim KH 

PROVIDER: S-EPMC10939876 | biostudies-literature | 2024 Mar

REPOSITORIES: biostudies-literature

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Integrated proteogenomic characterization of glioblastoma evolution.

Kim Kyung-Hee KH   Migliozzi Simona S   Koo Harim H   Hong Jun-Hee JH   Park Seung Min SM   Kim Sooheon S   Kwon Hyung Joon HJ   Ha Seokjun S   Garofano Luciano L   Oh Young Taek YT   D'Angelo Fulvio F   Kim Chan Il CI   Kim Seongsoo S   Lee Ji Yoon JY   Kim Jiwon J   Hong Jisoo J   Jang Eun-Hae EH   Mathon Bertrand B   Di Stefano Anna-Luisa AL   Bielle Franck F   Laurenge Alice A   Nesvizhskii Alexey I AI   Hur Eun-Mi EM   Yin Jinlong J   Shi Bingyang B   Kim Youngwook Y   Moon Kyung-Sub KS   Kwon Jeong Taik JT   Lee Shin Heon SH   Lee Seung Hoon SH   Gwak Ho Shin HS   Lasorella Anna A   Yoo Heon H   Sanson Marc M   Sa Jason K JK   Park Chul-Kee CK   Nam Do-Hyun DH   Iavarone Antonio A   Park Jong Bae JB  

Cancer cell 20240111 3


The evolutionary trajectory of glioblastoma (GBM) is a multifaceted biological process that extends beyond genetic alterations alone. Here, we perform an integrative proteogenomic analysis of 123 longitudinal glioblastoma pairs and identify a highly proliferative cellular state at diagnosis and replacement by activation of neuronal transition and synaptogenic pathways in recurrent tumors. Proteomic and phosphoproteomic analyses reveal that the molecular transition to neuronal state at recurrence  ...[more]

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