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Platelet RNA sequencing reveals profile of caffeic acid affecting hemostasis in mice.


ABSTRACT:

Background

Caffeic acid (CA) is a naturally occurring phenolic compound with diverse pharmacologic properties. CA plays a crucial role in hemostasis by increasing platelet count. However, the mechanism by which CA regulates platelets to promote hemostasis remains unclear.

Objectives

We aim to identify the potential target pathways and genes by which CA regulates platelets to promote hemostasis.

Methods

We performed RNA sequencing (RNA-seq) analysis of mouse platelet pools in both the CA-gavaged group and phosphate-buffered saline-gavaged group.

Results

The 12,934 expressed transcripts had been annotated after platelet RNA-seq. Compared with the phosphate-buffered saline group, 987 differentially expressed genes (DEGs) were identified, of which 466 were downregulated and 521 were upregulated in CA group. Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Reactome gene set enrichment analysis demonstrated that upregulated DEGs were enriched in the pathways of hemostasis, platelet activation, signaling, aggregation, and degranulation. Moreover, Kyoto Encyclopedia of Genes and Genomes and Reactome gene set enrichment analysis revealed that 5 of the 25 cosignificantly upregulated DEGs were essential in CA-mediated platelet regulation to promote hemostasis.

Conclusion

Our findings of platelet RNA-seq analysis demonstrate that CA regulates the gene expression of hemostasis and platelet activation-related pathways to increase platelet count and promote hemostasis. It will also provide reference molecular resources for future research on the function and mechanism by which CA regulates platelets to promote hemostasis.

SUBMITTER: Deng J 

PROVIDER: S-EPMC10943058 | biostudies-literature | 2024 Feb

REPOSITORIES: biostudies-literature

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Platelet RNA sequencing reveals profile of caffeic acid affecting hemostasis in mice.

Deng Jun J   Xiong Lv L   Ding Yajie Y   Cai Yaohua Y   Chen Zhaolin Z   Fan Fengjuan F   Luo Shanshan S   Hu Yu Y  

Research and practice in thrombosis and haemostasis 20240215 2


<h4>Background</h4>Caffeic acid (CA) is a naturally occurring phenolic compound with diverse pharmacologic properties. CA plays a crucial role in hemostasis by increasing platelet count. However, the mechanism by which CA regulates platelets to promote hemostasis remains unclear.<h4>Objectives</h4>We aim to identify the potential target pathways and genes by which CA regulates platelets to promote hemostasis.<h4>Methods</h4>We performed RNA sequencing (RNA-seq) analysis of mouse platelet pools i  ...[more]

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