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Molecular profiling identifies targeted therapy opportunities in pediatric solid cancer.


ABSTRACT: To evaluate the clinical impact of molecular tumor profiling (MTP) with targeted sequencing panel tests, pediatric patients with extracranial solid tumors were enrolled in a prospective observational cohort study at 12 institutions. In the 345-patient analytical population, median age at diagnosis was 12 years (range 0-27.5); 298 patients (86%) had 1 or more alterations with potential for impact on care. Genomic alterations with diagnostic, prognostic or therapeutic significance were present in 61, 16 and 65% of patients, respectively. After return of the results, impact on care included 17 patients with a clarified diagnostic classification and 240 patients with an MTP result that could be used to select molecularly targeted therapy matched to identified alterations (MTT). Of the 29 patients who received MTT, 24% had an objective response or experienced durable clinical benefit; all but 1 of these patients received targeted therapy matched to a gene fusion. Of the diagnostic variants identified in 209 patients, 77% were gene fusions. MTP with targeted panel tests that includes fusion detection has a substantial clinical impact for young patients with solid tumors.

SUBMITTER: Church AJ 

PROVIDER: S-EPMC10953704 | biostudies-literature | 2022 Aug

REPOSITORIES: biostudies-literature

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Molecular profiling identifies targeted therapy opportunities in pediatric solid cancer.

Church Alanna J AJ   Corson Laura B LB   Kao Pei-Chi PC   Imamovic-Tuco Alma A   Reidy Deirdre D   Doan Duong D   Kang Wenjun W   Pinto Navin N   Maese Luke L   Laetsch Theodore W TW   Kim AeRang A   Colace Susan I SI   Macy Margaret E ME   Applebaum Mark A MA   Bagatell Rochelle R   Sabnis Amit J AJ   Weiser Daniel A DA   Glade-Bender Julia L JL   Homans Alan C AC   Hipps John J   Harris Haley H   Manning Danielle D   Al-Ibraheemi Alyaa A   Li Yvonne Y   Gupta Hersh H   Cherniack Andrew D AD   Lo Ying-Chun YC   Strand Gianna R GR   Lee Lobin A LA   Pinches R Seth RS   Lazo De La Vega Lorena L   Harden Maegan V MV   Lennon Niall J NJ   Choi Seong S   Comeau Hannah H   Harris Marian H MH   Forrest Suzanne J SJ   Clinton Catherine M CM   Crompton Brian D BD   Kamihara Junne J   MacConaill Laura E LE   Volchenboum Samuel L SL   Lindeman Neal I NI   Van Allen Eliezer E   DuBois Steven G SG   London Wendy B WB   Janeway Katherine A KA  

Nature medicine 20220623 8


To evaluate the clinical impact of molecular tumor profiling (MTP) with targeted sequencing panel tests, pediatric patients with extracranial solid tumors were enrolled in a prospective observational cohort study at 12 institutions. In the 345-patient analytical population, median age at diagnosis was 12 years (range 0-27.5); 298 patients (86%) had 1 or more alterations with potential for impact on care. Genomic alterations with diagnostic, prognostic or therapeutic significance were present in  ...[more]

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