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Orb2 enables rare-codon-enriched mRNA expression during Drosophila neuron differentiation.


ABSTRACT: Regulation of codon optimality is an increasingly appreciated layer of cell- and tissue-specific protein expression control. Here, we use codon-modified reporters to show that differentiation of Drosophila neural stem cells into neurons enables protein expression from rare-codon-enriched genes. From a candidate screen, we identify the cytoplasmic polyadenylation element binding (CPEB) protein Orb2 as a positive regulator of rare-codon-dependent mRNA stability in neurons. Using RNA sequencing, we reveal that Orb2-upregulated mRNAs in the brain with abundant Orb2 binding sites have a rare-codon bias. From these Orb2-regulated mRNAs, we demonstrate that rare-codon enrichment is important for mRNA stability and social behavior function of the metabotropic glutamate receptor (mGluR). Our findings reveal a molecular mechanism by which neural stem cell differentiation shifts genetic code regulation to enable critical mRNA stability and protein expression.

SUBMITTER: Stewart RK 

PROVIDER: S-EPMC11190236 | biostudies-literature | 2024 Jun

REPOSITORIES: biostudies-literature

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Orb2 enables rare-codon-enriched mRNA expression during Drosophila neuron differentiation.

Stewart Rebeccah K RK   Nguyen Patrick P   Laederach Alain A   Volkan Pelin C PC   Sawyer Jessica K JK   Fox Donald T DT  

Nature communications 20240620 1


Regulation of codon optimality is an increasingly appreciated layer of cell- and tissue-specific protein expression control. Here, we use codon-modified reporters to show that differentiation of Drosophila neural stem cells into neurons enables protein expression from rare-codon-enriched genes. From a candidate screen, we identify the cytoplasmic polyadenylation element binding (CPEB) protein Orb2 as a positive regulator of rare-codon-dependent mRNA stability in neurons. Using RNA sequencing, we  ...[more]

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