A simple MATLAB toolbox for analyzing calcium imaging data in vitro and in vivo.

ABSTRACT:

Background

Fluorescence imaging of calcium dynamics in neuronal populations is powerful because it offers a way of relating the activity of individual cells to the broader population of nearby cells. The method's growth across neuroscience has particularly been driven by the introduction of sophisticated mathematical techniques related to motion correction, image registration, cell detection, spike estimation, and population characterization. However, for many researchers, making good use of these techniques has been difficult because they have been devised by different workers and impose differing - and sometimes stringent - technical requirements on those who seek to use them.

New method

We have built a simple toolbox of analysis routines that encompass the complete workfl

SUBMITTER: Desai NS 

PROVIDER: S-EPMC11289828 | biostudies-literature | 2024 Sep

REPOSITORIES: biostudies-literature