Unknown

Dataset Information

0

Determining expression changes of ANO7 and SLC38A4 membrane transporters in colorectal cancer.


ABSTRACT: Membrane transporters are proteins responsible for facilitating the movement of molecules within biological membranes. They play a vital role in maintaining cellular homeostasis by regulating the transport of nutrients, ions, and other molecules into and out of cells. Our aim is to identify biomarkers in colorectal cancer using membrane transporter proteins. We utilized COAD TCGA data for this purpose. Subsequently, we conducted differential gene analysis and feature selection using membrane transporter proteins. Furthermore, we identified two potential genes, including ANO7 and SLC38A4. To validate the expression profiles of ANO7 and SLC38A4, key genes in this context, RT-qPCR was employed on colorectal cancer samples and adjacent normal tissues. Additionally, utilizing GEPIA2, Kaplan-Meier survival analysis, and cBioPortal, we assessed the status of these genes in various cancers, examining their methylation and mutation patterns. In conclusion, we suggest that ANO7 and SLC38A4 serve as prognostic biomarkers in colorectal cancer.

SUBMITTER: Khosroshahi EM 

PROVIDER: S-EPMC11305260 | biostudies-literature | 2024 Jul

REPOSITORIES: biostudies-literature

altmetric image

Publications

Determining expression changes of ANO7 and SLC38A4 membrane transporters in colorectal cancer.

Khosroshahi Elaheh Mohandesi EM   Maghsoudloo Mazaher M   Fahimi Hossein H   Mokhtari Khatere K   Entezari Maliheh M   Peymani Maryam M   Hashemi Mehrdad M   Wan Runlan R  

Heliyon 20240711 14


Membrane transporters are proteins responsible for facilitating the movement of molecules within biological membranes. They play a vital role in maintaining cellular homeostasis by regulating the transport of nutrients, ions, and other molecules into and out of cells. Our aim is to identify biomarkers in colorectal cancer using membrane transporter proteins. We utilized COAD TCGA data for this purpose. Subsequently, we conducted differential gene analysis and feature selection using membrane tra  ...[more]

Similar Datasets

| S-EPMC6589920 | biostudies-literature
| S-EPMC9898302 | biostudies-literature
| S-EPMC9239746 | biostudies-literature
| S-EPMC2736974 | biostudies-other
| S-EPMC11319200 | biostudies-literature
| S-EPMC11807338 | biostudies-literature
| S-EPMC7877177 | biostudies-literature
| S-EPMC5745594 | biostudies-literature
| S-EPMC10989684 | biostudies-literature
| S-EPMC3688733 | biostudies-literature