Dataset Information

A federated learning architecture for secure and private neuroimaging analysis.

ABSTRACT: The amount of biomedical data continues to grow rapidly. However, collecting data from multiple sites for joint analysis remains challenging due to security, privacy, and regulatory concerns. To overcome this challenge, we use federated learning, which enables distributed training of neural network models over multiple data sources without sharing data. Each site trains the neural network over its private data for some time and then shares the neural network parameters (i.e., weights and/or gradients) with a federation controller, which in turn aggregates the local models and sends the resulting community model back to each site, and the process repeats. Our federated learning architecture, MetisFL, provides strong security and privacy. First, sample data never leave a site. Second, neural network parameters are encrypted before transmission and the global neural model is computed under fully homomorphic encryption. Finally, we use information-theoretic methods to limit information leakage from the neural model to prevent a "curious" site from performing model inversion or membership attacks. We present a thorough evaluation of the performance of secure, private federated learning in neuroimaging tasks, including for predicting Alzheimer's disease and for brain age gap estimation (BrainAGE) from magnetic resonance imaging (MRI) studies in challenging, heterogeneous federated environments where sites have different amounts of data and statistical distributions.

SUBMITTER: Stripelis D

PROVIDER: S-EPMC11368680 | biostudies-literature | 2024 Aug

REPOSITORIES: biostudies-literature

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A federated learning architecture for secure and private neuroimaging analysis.

Stripelis Dimitris D Gupta Umang U Saleem Hamza H Dhinagar Nikhil N Ghai Tanmay T Anastasiou Chrysovalantis C Sánchez Rafael R Steeg Greg Ver GV Ravi Srivatsan S Naveed Muhammad M Thompson Paul M PM Ambite José Luis JL

Patterns (New York, N.Y.) 20240801 8

The amount of biomedical data continues to grow rapidly. However, collecting data from multiple sites for joint analysis remains challenging due to security, privacy, and regulatory concerns. To overcome this challenge, we use federated learning, which enables distributed training of neural network models over multiple data sources without sharing data. Each site trains the neural network over its private data for some time and then shares the neural network parameters (i.e., weights and/or grad ...[more]

PMID: 39233693

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Project description:Enhancing deep learning performance requires extensive datasets. Centralized training raises concerns about data ownership and security. Additionally, large models are often unsuitable for hospitals due to their limited resource capacities. Federated learning (FL) has been introduced to address these issues. However, FL faces challenges such as vulnerability to attacks, non-IID data, reliance on a central server, high communication overhead, and suboptimal model aggregation. Furthermore, FL is not optimized for realistic hospital database environments, where data are dynamically accumulated. To overcome these limitations, we propose federated influencer learning (FIL) as a secure and efficient collaborative learning paradigm. Unlike the server-client model of FL, FIL features an equal-status structure among participants, with an administrator overseeing the overall process. FIL comprises four stages: local training, qualification, screening, and influencing. Local training is similar to vanilla FL, except for the optional use of a shared dataset. In the qualification stage, participants are classified as influencers or followers. During the screening stage, the integrity of the logits from the influencer is examined. If the integrity is confirmed, the influencer shares their knowledge with the others. FIL is more secure than FL because it eliminates the need for model-parameter transactions, central servers, and generative models. Additionally, FIL supports model-agnostic training. These features make FIL particularly promising for fields such as healthcare, where maintaining confidentiality is crucial. Our experiments demonstrated the effectiveness of FIL, which outperformed several FL methods on large medical (X-ray, MRI, and PET) and natural (CIFAR-10) image dataset in a dynamically accumulating database environment, with consistently higher precision, recall, Dice score, and lower standard deviation between participants. In particular, in the PET dataset, FIL achieved about a 40% improvement in Dice score and recall.

Dataset Information

A federated learning architecture for secure and private neuroimaging analysis.

Publications

A federated learning architecture for secure and private neuroimaging analysis.

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