Combining graph neural networks and transformers for few-shot nuclear receptor binding activity prediction.

ABSTRACT: Nuclear receptors (NRs) play a crucial role as biological targets in drug discovery. However, determining which compounds can act as endocrine disruptors and modulate the function of NRs with a reduced amount of candidate drugs is a challenging task. Moreover, the computational methods for NR-binding activity prediction mostly focus on a single receptor at a time, which may limit their effectiveness. Hence, the transfer of learned knowledge among multiple NRs can improve the performance of molecular predictors and lead to the development of more effective drugs. In this research, we integrate graph neural networks (GNNs) and Transformers to introduce a few-shot GNN-Transformer, Meta-GTNRP to predict the binding activity of compounds using the combined information of different NRs and ident

SUBMITTER: Torres LHM 

PROVIDER: S-EPMC11429188 | biostudies-literature | 2024 Sep

REPOSITORIES: biostudies-literature