Critical Assessment of Protein Engineering (CAPE): A Student Challenge on the Cloud.

ABSTRACT: The success of AlphaFold in protein structure prediction highlights the power of data-driven approaches in scientific research. However, developing machine learning models to design and engineer proteins with desirable functions is hampered by limited access to high-quality data sets and experimental feedback. The Critical Assessment of Protein Engineering (CAPE) challenge addresses these issues through a student-focused competition, utilizing cloud computing and biofoundries to lower barriers to entry. CAPE serves as an open platform for community learning, where mutant data sets and design algorithms from past contestants help improve overall performance in subsequent rounds. Through two competition rounds, student participants collectively designed >1500 new mutant sequences, with the b

SUBMITTER: Fu L 

PROVIDER: S-EPMC11574941 | biostudies-literature | 2024 Nov

REPOSITORIES: biostudies-literature