The SmARTR pipeline: A modular workflow for the cinematic rendering of 3D scientific imaging data.

ABSTRACT: Advancements in noninvasive surface and internal imaging techniques, along with computational methods, have revolutionized 3D visualization of organismal morphology-enhancing research, medical anatomical analysis, and facilitating the preservation and digital archiving of scientific specimens. We introduce the SmARTR pipeline (Small Animal Realistic Three-dimensional Rendering), a comprehensive workflow integrating wet lab procedures, 3D data acquisition, and processing to produce photorealistic scientific data through 3D cinematic rendering. This versatile pipeline supports multiscale visualizations-from tissue-level to whole-organism details across diverse living organisms-and is adaptable to various imaging sources. Its modular design and customizable rendering scenarios, enabled by the

SUBMITTER: Macri S 

PROVIDER: S-EPMC11667014 | biostudies-literature | 2024 Dec

REPOSITORIES: biostudies-literature