Protomix: a Python package for ¹H-NMR metabolomics data preprocessing.

ABSTRACT:

Motivation

NMR-based metabolomics is a field driven by technological advancements, necessitating the use of advanced preprocessing tools. Despite this need, there is a remarkable scarcity of comprehensive and user-friendly preprocessing tools in Python. To bridge this gap, we have developed Protomix-a Python package designed for metabolomics research. Protomix offers a set of automated, efficient, and user-friendly signal-preprocessing steps, tailored to streamline and enhance the preprocessing phase in metabolomics studies.

Results

This package presents a comprehensive preprocessing pipeline compatible with various data analysis tools. It encompasses a suite of functionalities for data extraction, preprocessing, and interactive visualization. Additionally, it includes a tut

SUBMITTER: Zniber M 

PROVIDER: S-EPMC11671038 | biostudies-literature | 2025

REPOSITORIES: biostudies-literature