The iPhylo suite: an interactive platform for building and annotating biological and chemical taxonomic trees.

ABSTRACT: Accurate and rapid taxonomic classifications are essential for systematically exploring organisms and metabolites in diverse environments. Many tools have been developed for biological taxonomic trees, but limitations apply, and a streamlined method for constructing chemical taxonomic trees is notably absent. We present the iPhylo suite (https://www.iphylo.net/), a comprehensive, automated, and interactive platform for biological and chemical taxonomic analysis. The iPhylo suite features web-based modules for the interactive construction and annotation of taxonomic trees and a stand-alone command-line interface (CLI) for local operation or deployment on high-performance computing (HPC) clusters. iPhylo supports National Center for Biotechnology Information (NCBI) taxonomy for biologicals a

SUBMITTER: Li Y 

PROVIDER: S-EPMC11684897 | biostudies-literature | 2024 Nov

REPOSITORIES: biostudies-literature