EnrichRBP: an automated and interpretable computational platform for predicting and analysing RNA-binding protein events.

ABSTRACT:

Motivation

Predicting RNA-binding proteins (RBPs) is central to understanding post-transcriptional regulatory mechanisms. Here, we introduce EnrichRBP, an automated and interpretable computational platform specifically designed for the comprehensive analysis of RBP interactions with RNA.

Results

EnrichRBP is a web service that enables researchers to develop original deep learning and machine learning architectures to explore the complex dynamics of RBPs. The platform supports 70 deep learning algorithms, covering feature representation, selection, model training, comparison, optimization, and evaluation, all integrated within an automated pipeline. EnrichRBP is adept at providing comprehensive visualizations, enhancing model interpretability, and facilitating the discovery o

SUBMITTER: Wang Y 

PROVIDER: S-EPMC11783304 | biostudies-literature | 2024 Dec

REPOSITORIES: biostudies-literature