Plastome-based subgenus-level phylogenetic backbone of hawthorns: insights into the maternal position and taxonomic synopsis of Crataegusshandongensis (Rosaceae, Maleae).

ABSTRACT: The recent recognition of the five-subgenera classification within Crataegus has prompted discussion about the maternal phylogenetic relationships among these subgenera, with inconsistencies in taxon sampling, marker selection, and inference methods contributing to differing interpretations. In this study, we performed deep genome skimming sequencing and assembled 63 whole plastomes, including 58 from Crataegus and five from related genera as the outgroups. We employed multiple phylogenetic inference methods (Maximum Likelihood and Bayesian Inference) to reconstruct an accurate phylogeny. The whole plastome-based, maternally inherited trees consistently supported two major clades within Crataegus: one comprising C.subg.Crataegus and C.subg.Brevispinae, the other encomp

SUBMITTER: Lin XH 

PROVIDER: S-EPMC11840429 | biostudies-literature | 2025

REPOSITORIES: biostudies-literature