A Scalable, Web-Based Platform for Proteomics Data Processing, Result Storage and Analysis.

ABSTRACT: The exponential increase in proteomics data presents critical challenges for conventional processing workflows. These pipelines often consist of fragmented software packages, glued together using complex in-house scripts or error-prone manual workflows running on local hardware, which are costly to maintain and scale. The MSAID Platform offers a fully automated, managed proteomics data pipeline, consolidating formerly disjointed functions into unified, API-driven services that cover the entire process from raw data to biological insights. Backed by the cloud-native search algorithm CHIMERYS, as well as scalable cloud compute instances and data lakes, the platform facilitates efficient processing of large data sets, automation of processing via the command line, systematic result storage, a

SUBMITTER: Schneider M 

PROVIDER: S-EPMC11894649 | biostudies-literature | 2025 Mar

REPOSITORIES: biostudies-literature