Ontology highlight
ABSTRACT: Background
Genome-wide association studies (GWAS) of Alzheimer's disease (AD) have identified a plethora of risk loci. However, the disease variants/genes and the underlying mechanisms have not been extensively studied.Methods
Bulk ATAC-seq was performed in induced pluripotent stem cells (iPSCs) differentiated various brain cell types to identify allele-specific open chromatin (ASoC) SNPs. CRISPR-Cas9 editing generated isogenic pairs, which were then differentiated into glutamatergic neurons (iGlut). Transcriptomic analysis and functional studies of iGlut co-cultured with mouse astrocytes assessed neuronal excitability and lipid droplet formation.Results
We identified a putative causal SNP of CLU that impacted neuronal chromatin accessibility to transcription-factor
SUBMITTER: Zhao X
PROVIDER: S-EPMC12049787 | biostudies-literature | 2025 May
REPOSITORIES: biostudies-literature