Transcriptomic Profiling of Hypoxia-Adaptive Responses in Tibetan Goat Fibroblasts.

ABSTRACT: The Tibetan goat (Capra hircus) exhibits remarkable adaptations to high-altitude hypoxia, yet the molecular mechanisms remain unclear. This study integrates RNA-seq, WGCNA, and machine learning to explore gene-environment interactions (G × E) in hypoxia adaptation. Fibroblasts from the Tibetan goat and Yunling goat were cultured under hypoxic (1% O₂) and normoxic (21% O₂) conditions, respectively. This identified 68 breed-specific (G), 100 oxygen-responsive (E), and 620 interaction-driven (I) Differentially Expressed Genes (DEGs). The notably higher number of interaction-driven DEGs compared to other effects highlights transcriptional plasticity. We defined two gene sets: Environmental Stress Genes (n = 632, E ∪ I) and Genetic Adaptation Genes (n<

SUBMITTER: Tang L 

PROVIDER: S-EPMC12108510 | biostudies-literature | 2025 May

REPOSITORIES: biostudies-literature