ScCompass: An Integrated Multi-Species scRNA-seq Database for AI-Ready.

ABSTRACT: Emerging single-cell sequencing technology has generated large amounts of data, allowing analysis of cellular dynamics and gene regulation at the single-cell resolution. Advances in artificial intelligence enhance life sciences research by delivering critical insights and optimizing data analysis processes. However, inconsistent data processing quality and standards remain to be a major challenge. Here scCompass is proposed, which provides a comprehensive resource designed to build large-scale, multi-species, and model-friendly single-cell data collection. By applying standardized data pre-processing, scCompass integrates and curates transcriptomic data from nearly 105 million single cells across 13 species. Using this extensive dataset, it is able to identify stable expression genes (SEGs

SUBMITTER: Wang P 

PROVIDER: S-EPMC12224968 | biostudies-literature | 2025 May

REPOSITORIES: biostudies-literature