Ontology highlight
ABSTRACT: Background & aims
GATA family transcription factors are somatically variable (SV) in esophageal adenocarcinomas (EAC) and inducible by simulated reflux. Our study examines the mechanisms whereby GATA family members (GATA4, GATA6, and the atypical TRPS-1) influence oncogenesis during the Barrett's esophagus (BE) metaplasia-dysplasia transition preceding EAC.Methods
RNAseq analyses of esophageal cell lines and lesion-derived adult stem cells (ASCs) in conjunction shRNA- or CRISPR-facilitated gene silencing, together with reanalysis of The Cancer Genome Atlas data, spatial transcriptomics, and organ-on-a-chip studies were used.Results
Although a gastroesophageal reflux disease history positively correlated with GATA4/6 somatically variable and a columnar-associated gen
SUBMITTER: Abuhussein O
PROVIDER: S-EPMC12311540 | biostudies-literature | 2025
REPOSITORIES: biostudies-literature