SEAHORSE: A Serendipity Engine Assaying Heterogeneous Omics-Related Sampling Experiments.

ABSTRACT: Large-scale, open-access data sets such as the Genotype Tissue Expression Project (GTEx) and The Cancer Genome Atlas (TCGA) include multi-omic data on large numbers of samples along with extensive clinical and phenotypic information. These datasets provide a unique opportunity to discover correlations among clinical and genomic data features that can lead to testable hypotheses and new discoveries. SEAHORSE (http://seahorse.networkmedicine.org/) is a web-based database and search tool for exploratory data analysis in which we have pre-computed statistical associations between available data elements. An easy-to-use user interface allows users to explore significant associations using tabulated summary statistics, data visualizations, and functional enrichment analyses (using RNA-seq data)

SUBMITTER: Quackenbush A 

PROVIDER: S-EPMC12393347 | biostudies-literature | 2025 Aug

REPOSITORIES: biostudies-literature