DgeaHeatmap: an R package for transcriptomic analysis and heatmap generation.

ABSTRACT:

Motivation

The growing use of transcriptomic data from platforms like Nanostring GeoMx DSP demands accessible and flexible tools for differential gene expression analysis and heatmap generation. Current web-based tools often lack transparency, modifiability, and independence from external servers creating barriers for researchers seeking customizable workflows, as well as data privacy and security. Additionally, tools that can be utilized by individuals with minimal bioinformatics expertise provide an inclusive solution, empowering a broader range of users to analyze complex data effectively.

Results

Here, we introduce Differential Gene Expression Analysis and Heatmaps (DgeaHeatmap), an R package offering streamlined and user-friendly functions for transcriptomic data analys

SUBMITTER: Lancelle LJ 

PROVIDER: S-EPMC12401572 | biostudies-literature | 2025

REPOSITORIES: biostudies-literature