MicrobiomeKG: bridging microbiome research and host health through knowledge graphs.

ABSTRACT: The microbiome represents a complex community of trillions of microorganisms residing in various body parts and plays critical roles in maintaining host health and wellbeing. Understanding the interactions between microbiota and their host offers valuable insights into potential strategies for promoting health, including microbiome-targeted interventions. We have created MicrobiomeKG, a knowledge graph for microbiome research, that bridges various taxa and microbial pathways with host health. This novel knowledge graph derives algorithmically generated knowledge assertions from the supplementary tables that support published microbiome papers. By identifying knowledge assertions from supplementary tables and expressing them as knowledge graphs, we are casting this valuable content into a f

SUBMITTER: Goetz SL 

PROVIDER: S-EPMC12425944 | biostudies-literature | 2025

REPOSITORIES: biostudies-literature