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Dataset Information

DEFGermplasm: a comprehensive digital platform for forest genomic and phenotype data integration.


ABSTRACT: Forest germplasm resources are indispensable resources for ecosystem stability and economic value. However, they are increasingly threatened by environmental changes and human activities and urgently need advanced management methods. Concurrently, traditional management methods are unable to cope with the increasingly complex data in the era of advanced information technology. Therefore, we developed DEFGermplasm (https://defgermplasm.com), a digital platform utilizing Flask framework, Python, MySQL, NGINX, Gunicorn, HTML5, JavaScript, JBrowse, SequenceServer, Seaborn, and Echarts, taking the germplasm resources of pecan, hickory, Chinese fir, and phoebe. The platform integrates genomic, transcriptomic, phenotypic, and physiological data, utilizing user-friendly visualization tools to achi

SUBMITTER: Du M 

PROVIDER: S-EPMC12434696 | biostudies-literature | 2025

REPOSITORIES: biostudies-literature