MSI.EAGLE: An Open-Source GUI for Streamlined Mass Spectrometry Imaging Analysis.

ABSTRACT: Mass Spectrometry Imaging (MSI) is an emergent tool for analyzing spatial molecular distributions, yet data complexity often hinders effective analysis. MSI.EAGLE, an open-source R-Shiny application, makes analysis accessible for non-specialists by integrating advanced tools in a user-friendly interface. The workflow leverages tools from the Cardinal MSI package, with enhanced phenotyping, segmentation, statistical analysis and visualization. The application addresses a gap in spatial biology research by empowering a broader scientific community.

SUBMITTER: Boehmler DJ 

PROVIDER: S-EPMC12439914 | biostudies-literature | 2025 Sep

REPOSITORIES: biostudies-literature