Transcriptome and methane emission dataset of indica and japonica rice cultivars (93-11, Milyang352, Milyang392) at tillering and heading stages.

ABSTRACT: This dataset comprises transcriptome profiles and methane emission measurements collected from roots and stems (including leaves) of three rice cultivars: Indica 93-11, Japonica Milyang352, and Milyang392 (an anther-culture line derived from 93-11 × Milyang352 with a high Indica gene proportion). Notably, Milyang392 exhibited the lowest methane emission among the three cultivars, highlighting its potential for climate-resilient breeding. Samples were collected at the tillering stage (June 28 and July 12, 2022) and heading stage (July 26 and August 11, 2022), with three biological replicates per condition, totaling 72 samples. RNA-Seq data were generated using the Illumina HiSeq platform (paired-end, 150 bp), and low-quality reads (Phred < 20, length < 50 bp) were filtered using Trimmomatic

SUBMITTER: Oh JH 

PROVIDER: S-EPMC12546455 | biostudies-literature | 2025 Oct

REPOSITORIES: biostudies-literature