Mechanistic basis for the opposing effects of H2A and H2B ubiquitination on nucleosome stability and dynamics.

ABSTRACT:

Background

Nucleosome ubiquitination at lysine 119 of histone H2A (H2AK119ub) and lysine 120 of histone H2B (H2BK120ub) are prominent post-translational modifications with opposing roles in chromatin regulation. Although H2AK119ub is associated with transcriptional repression and H2BK120ub with activation, the molecular basis for these contrasting effects has remained unclear.

Results

Here, we use microsecond all-atom and millisecond coarse-grained molecular dynamics simulations to reveal how the position of ubiquitin reshapes nucleosome structure and assembly. H2AK119ub rigidifies the histone core by indirectly reinforcing the L1-L1 interface between H2A histones, strengthening both tetramer-dimer and dimer-dimer interactions, and slowing complete nucleosome assembly. In co

SUBMITTER: Baweja L 

PROVIDER: S-EPMC12628893 | biostudies-literature | 2025 Nov

REPOSITORIES: biostudies-literature