Chromosome-level dataset from <i>de novo</i> assembly of a Fabada common bean genotype using Illumina and PacBio technologies.

ABSTRACT: Fabada is a traditional market class of common bean (Phaseolus vulgaris L.) cultivated in northern Spain, recognized for its distinctive seed phenotype with very large, white, and oblong seeds. High-throughput genotyping of this market class revealed that its genome is predominantly of Andean origin, with approximately 30 % introgression from the Mesoamerican gene pool. The de novo genome assembly of the A25 bean genotype, derived from the local cultivar 'Andecha' which belongs to the Fabada market class, is described. Two complementary technologies were used: PacBio (Sequel II) for long reads and Illumina (NovaSeq PE150) for short reads. The depth of coverage achieved was 112x for Illumina and 47x for PacBio. Genome assembly resulted in 468,9 Mbp (98.5 % BUSCO completeness), organized int

SUBMITTER: Maria J 

PROVIDER: S-EPMC12666108 | biostudies-literature | 2025 Dec

REPOSITORIES: biostudies-literature