SpectralNET--an application for spectral graph analysis and visualization.

ABSTRACT:

Background

Graph theory provides a computational framework for modeling a variety of datasets including those emerging from genomics, proteomics, and chemical genetics. Networks of genes, proteins, small molecules, or other objects of study can be represented as graphs of nodes (vertices) and interactions (edges) that can carry different weights. SpectralNET is a flexible application for analyzing and visualizing these biological and chemical networks.

Results

Available both as a standalone .NET executable and as an ASP.NET web application, SpectralNET was designed specifically with the analysis of graph-theoretic metrics in mind, a computational task not easily accessible using currently available applications. Users can choose either to upload a network for analysis using

SUBMITTER: Forman JJ 

PROVIDER: S-EPMC1276787 | biostudies-literature | 2005 Oct

REPOSITORIES: biostudies-literature