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Oesophageal Epithelial Cell-Intrinsic MHCII Regulates Food Antigen-Dependent Eosinophilic Esophagitis in an IFNγ-Dependent Manner.


ABSTRACT:

Background

Eosinophilic oesophagitis (EoE) is a chronic food allergy that causes oesophageal inflammation and dysfunction. Recent work demonstrates IFNγ-dependent gene signatures in inflamed EoE biopsies. IFNγ has been implicated in the promotion of MHCII expression on oesophageal epithelial cells (EECs). However, the regulation of EEC-MHCII expression in vivo, and its contribution to EoE, is unknown.

Objective

The objective of this study was to determine the regulation and role of EEC-intrinsic MHCII expression in EoE.

Methods

We examined the expression of HLA II-pathway transcripts in human EECs using single cell RNA-seq datasets and primary human tissues and mouse systems to interrogate the contribution of IFNγ to EEC-MHCII expression. Finally, we used a mouse disease model to test the contribution of epithelial MHCII to food antigen-dependent EoE.

Results

HLA II transcripts were upregulated in EECs of active EoE patients, compared with controls. Similarly, EEC-MHCII expression was higher in mice with EoE-like inflammation. EEC-MHCII expression was governed by IFNγ-responsive transcriptional regulation. EEC-specific MHCII deficiency resulted in exacerbated eosinophilic inflammation in a model of food antigen-dependent EoE.

Conclusion

We find a novel immunoregulatory role for IFNγ-dependent EEC-MHCII in the context of oesophageal food allergy.

Clinical relevance

Our results expand our understanding of oesophageal immune physiology and identify EEC-MHCII as mediating an anti-inflammatory axis that could be leveraged therapeutically.

SUBMITTER: Rodriguez-Lopez EM 

PROVIDER: S-EPMC12813630 | biostudies-literature | 2026 Feb

REPOSITORIES: biostudies-literature

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Publications

Oesophageal Epithelial Cell-Intrinsic MHCII Regulates Food Antigen-Dependent Eosinophilic Esophagitis in an IFNγ-Dependent Manner.

Rodríguez-López Eric M EM   Clement Rachel L RL   Lal Megha M   Zhou Yusen Y   Carro Stephen D SD   Assenmacher Charles-Antoine CA   Gautam Ravi R   Beers Jarad J   Muir Amanda B AB   Spergel Jonathan M JM   Ruffner Melanie A MA   Eisenlohr Laurence C LC   Hill David A DA  

Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology 20251222 2


<h4>Background</h4>Eosinophilic oesophagitis (EoE) is a chronic food allergy that causes oesophageal inflammation and dysfunction. Recent work demonstrates IFNγ-dependent gene signatures in inflamed EoE biopsies. IFNγ has been implicated in the promotion of MHCII expression on oesophageal epithelial cells (EECs). However, the regulation of EEC-MHCII expression in vivo, and its contribution to EoE, is unknown.<h4>Objective</h4>The objective of this study was to determine the regulation and role o  ...[more]

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