Steric and Electronic Effects in the Enzymatic Catalysis of Choline-TMA Lyase.

ABSTRACT: An important microbial enzymatic pathway in the gut is choline/phosphatidylcholine degradation in which intestinal microbes utilize dietary choline to produce TMA via the choline utilization cluster polypeptide C (CutC) enzyme, a member of the glycyl radical enzyme family. Our goal in this theoretical work was to study the reaction mechanism and elucidate how the enzyme environment (steric and electronic) modulates the reaction path. Dissecting the effect of the enzyme environment on the reaction mechanism and shedding light on how steric and electronic effects affect the reaction path is an insightful and significant contribution of this work. Our theoretical results suggest that the final product of enzyme catalysis might be carbinolamine and not TMA and acetaldehyde. In addition, we fou

SUBMITTER: Gogonea V 

PROVIDER: S-EPMC12838924 | biostudies-literature | 2025 Dec

REPOSITORIES: biostudies-literature