GPXplore: an intelligent computational framework for precise gene promoter extraction.

ABSTRACT: Efficient and precise extraction of gene promoter regions is vital for understanding gene regulation, with broad implications in gene editing, functional genomics, and disease research. However, existing tools often fall short in scalability, usability and performance. To address these limitations, we present "GPXplore," a computational tool designed for the precise and user-friendly extraction of gene promoters from genomic data. It leverages vectorized data processing techniques to significantly reduce data processing time, enhancing speed and efficiency in large-scale promoter extraction tasks. GPXplore retrieves upstream and downstream sequences relative to gene loci and supports customizable parameters, enabling users to define region lengths based on specific research needs. The tool

SUBMITTER: Godara S 

PROVIDER: S-EPMC12909496 | biostudies-literature | 2026

REPOSITORIES: biostudies-literature