AffinDB: a freely accessible database of affinities for protein-ligand complexes from the PDB.

ABSTRACT: AffinDB is a database of affinity data for structurally resolved protein-ligand complexes from the Protein Data Bank (PDB). It is freely accessible at http://www.agklebe.de/affinity. Affinity data are collected from the scientific literature, both from primary sources describing the original experimental work of affinity determination and from secondary references which report affinity values determined by others. AffinDB currently contains over 730 affinity entries covering more than 450 different protein-ligand complexes. Besides the affinity value, PDB summary information and additional data are provided, including the experimental conditions of the affinity measurement (if available in the corresponding reference); 2D drawing, SMILES code and molecular weight of the ligand; links to ot

SUBMITTER: Block P 

PROVIDER: S-EPMC1347402 | biostudies-literature | 2006 Jan

REPOSITORIES: biostudies-literature