Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists.

ABSTRACT:

Background

The Ashbya Genome Database (AGD) 3.0 is an innovative cross-species genome and transcriptome browser based on release 40 of the Ensembl developer environment.

Description

AGD 3.0 provides information on 4726 protein-encoding loci and 293 non-coding RNA genes present in the genome of the filamentous fungus Ashbya gossypii. A synteny viewer depicts the chromosomal location and orientation of orthologous genes in the budding yeast Saccharomyces cerevisiae. Genome-wide expression profiling data obtained with high-density oligonucleotide microarrays (GeneChips) are available for nearly all currently annotated protein-coding loci in A. gossypii and S. cerevisiae.

Conclusion

AGD 3.0 hence provides yeast- and genome biologists with comprehensive report pages includ

SUBMITTER: Gattiker A 

PROVIDER: S-EPMC1779777 | biostudies-literature | 2007 Jan

REPOSITORIES: biostudies-literature