Functional and crystal structure analysis of active site adaptations of a potent anti-angiogenic human tRNA synthetase.

ABSTRACT: Higher eukaryote tRNA synthetases have expanded functions that come from enlarged, more differentiated structures that were adapted to fit aminoacylation function. How those adaptations affect catalytic mechanisms is not known. Presented here is the structure of a catalytically active natural splice variant of human tryptophanyl-tRNA synthetase (TrpRS) that is a potent angiostatic factor. This and related structures suggest that a eukaryote-specific N-terminal extension of the core enzyme changed substrate recognition by forming an active site cap. At the junction of the extension and core catalytic unit, an arginine is recruited to replace a missing landmark lysine almost 200 residues away. Mutagenesis, rapid kinetic, and substrate binding studies support the functional significance of th

SUBMITTER: Yang XL 

PROVIDER: S-EPMC2104486 | biostudies-literature | 2007 Jul

REPOSITORIES: biostudies-literature