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Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database.


ABSTRACT: The Ensembl Trace Archive (http://trace.ensembl.org/) and the EMBL Nucleotide Sequence Database (http://www.ebi.ac.uk/embl/), known together as the European Nucleotide Archive, continue to see growth in data volume and diversity. Selected major developments of 2007 are presented briefly, along with data submission and retrieval information. In the face of increasing requirements for nucleotide trace, sequence and annotation data archiving, data capture priority decisions have been taken at the European Nucleotide Archive. Priorities are discussed in terms of how reliably information can be captured, the long-term benefits of its capture and the ease with which it can be captured.

SUBMITTER: Cochrane G 

PROVIDER: S-EPMC2238915 | biostudies-literature | 2008 Jan

REPOSITORIES: biostudies-literature

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Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database.

Cochrane Guy G   Akhtar Ruth R   Aldebert Philippe P   Althorpe Nicola N   Baldwin Alastair A   Bates Kirsty K   Bhattacharyya Sumit S   Bonfield James J   Bower Lawrence L   Browne Paul P   Castro Matias M   Cox Tony T   Demiralp Fehmi F   Eberhardt Ruth R   Faruque Nadeem N   Hoad Gemma G   Jang Mikyung M   Kulikova Tamara T   Labarga Alberto A   Leinonen Rasko R   Leonard Steven S   Lin Quan Q   Lopez Rodrigo R   Lorenc Dariusz D   McWilliam Hamish H   Mukherjee Gaurab G   Nardone Francesco F   Plaister Sheila S   Robinson Stephen S   Sobhany Siamak S   Vaughan Robert R   Wu Dan D   Zhu Weimin W   Apweiler Rolf R   Hubbard Tim T   Birney Ewan E  

Nucleic acids research 20071126 Database issue


The Ensembl Trace Archive (http://trace.ensembl.org/) and the EMBL Nucleotide Sequence Database (http://www.ebi.ac.uk/embl/), known together as the European Nucleotide Archive, continue to see growth in data volume and diversity. Selected major developments of 2007 are presented briefly, along with data submission and retrieval information. In the face of increasing requirements for nucleotide trace, sequence and annotation data archiving, data capture priority decisions have been taken at the E  ...[more]

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