SR proteins and the nonsense-mediated decay mechanism are involved in human GLB1 gene alternative splicing.

ABSTRACT:

Background

The human GLB1 gene is known to give rise to two alternatively spliced mRNAs, which encode two different proteins: lysosomal beta-galactosidase (beta-gal) and elastin-binding protein (EBP). The beta-gal transcript includes the 16 exons of the GLB1 gene. In the EBP transcript, exons 3, 4 and 6 are skipped, while exon 5 has a different reading frame. However, little is known on how this alternative splicing is regulated.

Findings

Cycloheximide treatment of HeLa cells and human fibroblasts revealed the presence of new transcripts that are otherwise degraded by nonsense-mediated decay (NMD). A minigene carrying the exons involved in the alternative splicing of GLB1 was constructed. Improving the acceptor-site scores of exons 3 or 4 increased the relative inclusion of

SUBMITTER: Santamaria R 

PROVIDER: S-EPMC2631023 | biostudies-literature | 2008 Dec

REPOSITORIES: biostudies-literature