Parameter estimation for mathematical models of NKCC2 cotransporter isoforms.

ABSTRACT: An optimization problem, formulated using a nonlinear least-squares approach, was used to estimate parameters for kinetic models of the three isoforms of the kidney-specific Na-K-2Cl (NKCC2) cotransporter. Specifically, the optimization problem estimates the magnitude of model parameters (i.e., off-binding and translocation rate constants) by minimizing the distance between model unidirectional fluxes and published unidirectional (86)Rb(+) uptake curves for the A, B, and F isoforms of the NKCC2 cotransporter obtained in transfected Xenopus oocytes. By using different symmetry assumptions, NKCC2 models with five, six, seven, or eight parameters were evaluated. The optimization method identified parameter sets that yielded computed unidirectional fluxes consistent with the uptake data. Howev

SUBMITTER: Marcano M 

PROVIDER: S-EPMC2643858 | biostudies-literature | 2009 Feb

REPOSITORIES: biostudies-literature